| Runda | Tor | Data | Kierowca | Pojazd | Zespół |
|---|---|---|---|---|---|
| 1 |  Losail Grand Prix Kataru | 2016.03.20 | Honda NSF250RW |  Ongetta–Rivacold | |
| 2 |  Termas de Río Hondo | 2016.04.03 | Honda NSF250RW |  Honda Team Asia | |
| 3 |  Circuit of the Americas | 2016.04.10 | KTM RC250GP | Sky Racing Team VR46 | |
| 4 |  Jerez | 2016.04.24 | KTM RC250GP |  Red Bull KTM Ajo | |
| 5 |  Le Mans | 2016.05.08 | KTM RC250GP | Red Bull KTM Ajo | |
| 6 | Mugello | 2016.05.22 | KTM RC250GP | Red Bull KTM Ajo | |
| 7 | Barcelona-Catalunya | 2016.06.05 | Honda NSF250RW | Estrella Galicia 0,0 | |
| 8 |  Assen | 2016.06.26 | Mahindra MGP3O | Aspar Mahindra Team Moto3 | |
| 9 |  Sachsenring | 2016.07.17 | Honda NSF250RW | Honda Team Asia | |
| 10 |  Red Bull Ring | 2016.08.14 | KTM RC250GP | Leopard Racing | |
| 11 |  Brno | 2016.08.21 | Peugeot MGP3O | Peugeot MC Saxoprint | |
| 12 |  Silverstone | 2016.09.04 | KTM RC250GP | Red Bull KTM Ajo | |
| 13 | Misano | 2016.09.11 | KTM RC250GP | Red Bull KTM Ajo | |
| 14 | Aragón | 2016.09.25 | Honda NSF250RW | Estrella Galicia 0,0 | |
| 15 | Motegi | 2016.10.16 | Honda NSF250RW | Gresini Racing Moto3 | |
| 16 |  Phillip Island | 2016.10.23 | KTM RC250GP | Red Bull KTM Ajo | |
| 17 |  Sepang | 2016.10.30 | Mahindra MGP3O | Aspar Mahindra Team Moto3 | |
| 18 | Valencia | 2016.11.13 | KTM RC250GP | Red Bull KTM Ajo |
